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Test Code RPPCR / HPIV Extended Respiratory Panel, PCR

Important Note

This respiratory viral panel (RVP) tests only for Parainfluenza 1-4, human Metapneumovirus, Adenovirus, and Rhinovirus.

 This test is appropriate for use in severely immunocompromised and/or critically ill patients where respiratory viral panel results would be expected to alter the course of care (adjusting immunosuppression, avoiding high risk bronchoscopy, or influencing use of antiviral therapies).

 

  • Avoid the routine use of this test for evaluating suspected respiratory viral infections
  • A negative test does not exclude other respiratory viruses not included in the panel
  • Respiratory viral panels can continue to detect viruses months after disease resolution
  • Most respiratory viral illnesses in immunocompetent patients are managed symptomatically
  • The high cost of this test emphasizes the need to consider the management impact of results given the financial burden this panel may impose on the patient
  • Professional societies including the American Academy of Pediatrics and Infectious Disease Society of America do not recommend routine respiratory viral testing

Additional Codes

Software Test Code
Label Text - AdV/hMPV/RV                                                 

RPPCR

EPIC LAB9440
Label Text - Parainfluenza 1-4 HPIV
EPIC LAB9441

Performing Laboratory

NorDx Laboratories

Useful For

Detection of respiratory infections caused by the following:

  • Adenovirus
  • Human metapneumovirus
  • Human rhinovirus
  • Parainfluenza virus serotypes 1-4

This test is not recommended as a test of cure.

Method Name

Multiplex real-time Polymerase Chain Reaction (rt-PCR)

 

The Panther Fusion AdV/hMPV/RV and Paraflu assays involve the following steps: sample lysis, nucleic acid capture, elution transfer, and multiplex RT-PCR when analytes are simultaneously amplified, detected and differentiated. Nucleic acid capture and elution takes place in a single tube on the Panther Fusion system. The eluate is transferred to the Panther Fusion system reaction tube containing the assay reagents. Multiplex RT-PCR is then performed for the eluted nucleic acid on the Panther Fusion system.

For all targets, specific forward and reverse primers and probes amplify targets while simultaneously detecting and discriminating multiple target types via multiplex PCR. The Panther Fusion system compares the fluorescence signal to a predetermined cut-off to produce a qualitative result for the presence or absence of the analyte.

Reference Values

Not Detected (for all targets)

Days and Times Test Performed

Monday through Sunday, may vary

Report Available

Typically, 1 day

Up to 4 days

Specimen Type

Nasopharyngeal swab only

 

Acceptable swab types include polyester-, rayon-, or nylon-tipped swab with a non-porous shaft.

Preferred Container

3 mL Viral Transport Medium (VTM) or Universal Transport Medium (UTM)

Examples below:

Preferred Volume

3 mL

Specimen Collection and Handling

  1. Nasopharyngeal swab specimens should be collected according to standard technique and immediately placed into transport media and submitted for testing.
  2. Submit swab in original container

Specimen Stability Information

Specimen Type Temperature Time
Swab in Media Refrigerated 96 hours (4 days)
  Frozen 30 days

Add On Capable

Yes

Advance Beneficiary Notice Requirements

No ABN Required

CPT Code Information

CPT Code CPT Description CPT Disclaimer
87631 Respiratory virus (e.g. adenovirus, influenza virus, coronavirus, metapneumovirus, parainfluenza virus, respiratory syncytial virus, rhinovirus), includes multiplex amplified probe technique, multiple types or subtypes, 3 - 5 targets  
87632 Respiratory virus (e.g. adenovirus, influenza virus, coronavirus, metapneumovirus, parainfluenza virus, respiratory syncytial virus, rhinovirus), includes multiplex amplified probe technique, multiple types or subtypes, 6 - 11 targets  

CPT depends on inclusion of Parainfluenza in order set.

LOINC Code Information

Test Result Name

Result LOINC Value

Adenovirus

82160-3

Human Metapneumovirus

82165-2

Human Rhinovirus

82175-1

Parainfluenza Virus 1

82171-0

Parainfluenza Virus 2

82172-8

Parainfluenza Virus 3

82173-6

Parainfluenza Virus 4

82174-4

Rejection Information

Nasal or mid-turbinate collections will be rejected.

Cotton swabs or swabs with a wooden shaft will be rejected.

Any UTM or VTM that has a fill volume other than 3 mL.

Clinical Significance

Respiratory viruses are responsible for a wide range of acute respiratory tract infections including the common cold, influenza, and croup and represent the most common cause of acute illness in the United States. Disease severity can be especially high in the young, the immunocompromised, and elderly patients. Accurate and timely diagnosis of the cause of respiratory tract infections has many benefits. They include improved treatment of the patient by ensuring appropriate antiviral treatment (e.g. oseltamivir for influenza), decreasing the overall cost of care, reducing selection for antimicrobial resistant organisms due to excessive and inappropriate use of antibiotics,1 assisting infection control personnel in providing appropriate measures to minimize nosocomial spread, and providing valued information to public health authorities regarding which viruses are circulating in the community.

 

Adenoviruses are members of the Adenoviridae family which commonly cause respiratory illness which can range from the common cold to pneumonia, croup, and bronchitis. Depending on the type, Adenoviruses can cause other illnesses such as gastroenteritis, conjunctivitis, cystitis, and, less commonly, neurological disease. Infants and people with weakened immune systems are at high risk for developing severe illness caused by Adenovirus infection.

 

Human Metapneumovirus (hMPV) is a common respiratory pathogen associated with both upper and lower respiratory tract infections and may be a trigger for asthma. Symptoms commonly associated with hMPV include cough, fever, nasal congestion, and shortness of breath. Clinical symptoms of hMPV infection may progress to bronchiolitis or pneumonia and are similar to other viruses that cause upper and lower respiratory infections. The incubation period is estimated to be 3 to 6 days, and the median duration of illness can vary depending upon severity but is similar to other respiratory infections caused by viruses.

 

Rhinoviruses, members of the family Picornaviridae, are the causative pathogens in more than half of viral respiratory infections, and they are associated with acute exacerbations of respiratory disease, including asthma, sinusitis, otitis media, and COPD. Studies have confirmed rhinoviruses as being the most common cause of “the common cold” and affect all age groups. Symptoms usually include sore throat, runny nose, coughing, sneezing, watery eyes, headaches and body aches. Most people recover within about 7-10 days.

 

Human parainfluenza viruses (HPIVs) belong to the Paramyxoviridae family. There are four types (1 through 4). The clinical and epidemiological features for each HPIV type can vary. HPIVs commonly infect infants and young children, however, anyone can get the HPIV infection. HPIV-1 and HPIV-2 both cause croup, with HPIV-1 most often identified as the cause in children. Both can also cause upper and lower respiratory illness and cold-like symptoms. HPIV-3 is more often associated with bronchiolitis, bronchitis, and pneumonia. HPIV-4 is not recognized as often but may cause mild to severe respiratory tract illnesses. The incubation period, the time from exposure to HPIV to onset of symptoms, is generally 2 to 7 days.

Performing Location

NorDx Laboratories - Scarborough Campus